STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08012Uncharacterized protein. (493 aa)    
Predicted Functional Partners:
SARC_00374
JmjC domain-containing protein.
    
 0.999
SARC_13098
UAS domain-containing protein.
   
 0.996
SARC_10420
Uncharacterized protein.
   
 0.969
SARC_08781
NEDD8.
    
 0.965
SARC_07553
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.964
SARC_00913
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.937
SARC_12355
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.932
SARC_10317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.930
SARC_08460
Skp1 domain-containing protein.
   
 0.930
SARC_15293
WD_REPEATS_REGION domain-containing protein.
    
 0.905
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.