STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_07822GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (272 aa)    
Predicted Functional Partners:
SARC_10958
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
 
0.966
SARC_08054
Uncharacterized protein.
   
 
 0.930
SARC_09234
RPOLD domain-containing protein.
   
 
 0.928
SARC_06749
RTR1-type domain-containing protein.
    
 
 0.917
SARC_13705
DNA-directed RNA polymerase, alpha subunit, N terminal domain-containing protein.
   
 
 0.879
SARC_01403
Uncharacterized protein.
    
 
 0.865
SARC_12996
RPOLD domain-containing protein.
   
 
 0.855
SARC_12979
Uncharacterized protein.
    
 
 0.853
SARC_11304
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
   
 
 0.837
SARC_07058
RNA_pol_L_2 domain-containing protein.
   
 
 0.810
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.