STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_06805Uncharacterized protein. (557 aa)    
Predicted Functional Partners:
SARC_06807
Propionyl-CoA carboxylase beta chain, mitochondrial.
 
 0.997
SARC_06301
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
 
 0.996
SARC_14697
Uncharacterized protein.
 
     0.951
SARC_12045
Uncharacterized protein.
   
 0.946
SARC_04408
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.908
SARC_00897
PKS_AT domain-containing protein.
 
 
 0.897
SARC_11426
Malate synthase G.
  
 0.857
SARC_00696
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.854
SARC_12977
Uncharacterized protein.
  
 
 0.845
SARC_11304
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
   
  0.837
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.