STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_06437Phosphoribosylaminoimidazole carboxylase. (478 aa)    
Predicted Functional Partners:
SARC_08621
Bifunctional purine biosynthetic protein ADE1.
 0.997
SARC_10946
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.989
SARC_07322
Amidophosphoribosyltransferase.
 
 0.988
SARC_06901
Phosphoribosylformylglycinamidine synthase.
  
 0.981
SARC_04090
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
   
 
 0.978
SARC_01424
Bifunctional purine biosynthesis protein PURH.
 
 0.960
SARC_13023
Formyl_trans_N domain-containing protein.
  
 0.956
SARC_05653
Formyltetrahydrofolate deformylase.
  
 0.953
SARC_10740
Urease accessory protein UreD.
  
 0.933
SARC_06446
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 0.912
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.