Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SARC_00696 | SARC_01115 | A0A0L0GFW2 | A0A0L0GCW8 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.412 |
SARC_00696 | SARC_06301 | A0A0L0GFW2 | A0A0L0FXT5 | 4-hydroxyphenylpyruvate dioxygenase. | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. | 0.936 |
SARC_00696 | SARC_06807 | A0A0L0GFW2 | A0A0L0FW95 | 4-hydroxyphenylpyruvate dioxygenase. | Propionyl-CoA carboxylase beta chain, mitochondrial. | 0.936 |
SARC_00696 | SARC_07171 | A0A0L0GFW2 | A0A0L0FWY2 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.800 |
SARC_00696 | SARC_07474 | A0A0L0GFW2 | A0A0L0FUD0 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.991 |
SARC_00696 | SARC_08969 | A0A0L0GFW2 | A0A0L0FP74 | 4-hydroxyphenylpyruvate dioxygenase. | Hydroxyacylglutathione hydrolase. | 0.716 |
SARC_00696 | SARC_12977 | A0A0L0GFW2 | A0A0L0FDA9 | 4-hydroxyphenylpyruvate dioxygenase. | Uncharacterized protein. | 0.598 |
SARC_01115 | SARC_00696 | A0A0L0GCW8 | A0A0L0GFW2 | Uncharacterized protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.412 |
SARC_01115 | SARC_04233 | A0A0L0GCW8 | A0A0L0G325 | Uncharacterized protein. | Protein DJ-1. | 0.523 |
SARC_01115 | SARC_07171 | A0A0L0GCW8 | A0A0L0FWY2 | Uncharacterized protein. | Uncharacterized protein. | 0.851 |
SARC_01115 | SARC_07474 | A0A0L0GCW8 | A0A0L0FUD0 | Uncharacterized protein. | Homogentisate 1,2-dioxygenase. | 0.508 |
SARC_01115 | SARC_08917 | A0A0L0GCW8 | A0A0L0FPM4 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.682 |
SARC_01115 | SARC_08969 | A0A0L0GCW8 | A0A0L0FP74 | Uncharacterized protein. | Hydroxyacylglutathione hydrolase. | 0.495 |
SARC_01115 | SARC_12977 | A0A0L0GCW8 | A0A0L0FDA9 | Uncharacterized protein. | Uncharacterized protein. | 0.663 |
SARC_04233 | SARC_01115 | A0A0L0G325 | A0A0L0GCW8 | Protein DJ-1. | Uncharacterized protein. | 0.523 |
SARC_04233 | SARC_07171 | A0A0L0G325 | A0A0L0FWY2 | Protein DJ-1. | Uncharacterized protein. | 0.816 |
SARC_04233 | SARC_08969 | A0A0L0G325 | A0A0L0FP74 | Protein DJ-1. | Hydroxyacylglutathione hydrolase. | 0.794 |
SARC_06301 | SARC_00696 | A0A0L0FXT5 | A0A0L0GFW2 | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. | 4-hydroxyphenylpyruvate dioxygenase. | 0.936 |
SARC_06301 | SARC_06807 | A0A0L0FXT5 | A0A0L0FW95 | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. | Propionyl-CoA carboxylase beta chain, mitochondrial. | 0.739 |
SARC_06301 | SARC_07171 | A0A0L0FXT5 | A0A0L0FWY2 | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. | Uncharacterized protein. | 0.809 |
page 1 of 4