STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_06088D-2-hydroxyglutarate dehydrogenase, mitochondrial. (445 aa)    
Predicted Functional Partners:
SARC_12357
Uncharacterized protein.
    
 0.974
SARC_11950
Enhancer of polycomb-like protein.
   
 0.969
SARC_09921
SANT_DAMP1_like domain-containing protein.
   
 0.966
SARC_10928
Uncharacterized protein; Belongs to the actin family.
    
 0.939
SARC_07899
Uncharacterized protein; Belongs to the actin family.
    
 0.939
SARC_16180
Uncharacterized protein.
    
 0.935
SARC_10039
Uncharacterized protein.
    
 0.935
SARC_06916
Methyl-accepting transducer domain-containing protein.
   
 0.933
SARC_03522
MRG domain-containing protein.
   
 0.871
SARC_02575
MRG domain-containing protein.
   
 0.871
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.