STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_06003PKS_ER domain-containing protein. (328 aa)    
Predicted Functional Partners:
SARC_12977
Uncharacterized protein.
  
 0.837
SARC_08917
Cytochrome b5 heme-binding domain-containing protein.
  
 
 0.805
SARC_01073
Uncharacterized protein.
   
 0.694
SARC_00818
Phosphotransferase.
   
 0.694
SARC_02502
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.666
SARC_00696
4-hydroxyphenylpyruvate dioxygenase.
     
 0.657
SARC_01419
Oxidored_FMN domain-containing protein.
 
  
 0.653
SARC_00567
Deoxyribose-phosphate aldolase.
    
 0.653
SARC_05001
ATP synthase F1, epsilon subunit.
    
 0.652
SARC_08527
Acetyl-coenzyme A synthetase.
   
 
 0.629
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.