STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_06654PPM-type phosphatase domain-containing protein. (219 aa)    
Predicted Functional Partners:
SARC_07001
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
    
 0.855
SARC_01885
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.815
SARC_09976
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.777
SARC_02426
ANK_REP_REGION domain-containing protein.
   
 0.753
SARC_02547
Uncharacterized protein.
   
 0.744
SARC_14376
Uncharacterized protein.
   
 0.733
SARC_11152
CMGC/MAPK protein kinase.
   
 0.733
SARC_07884
Mitogen-activated protein kinase.
   
 0.733
SARC_00217
CMGC/DYRK protein kinase.
   
 0.733
SARC_11955
MSP domain-containing protein.
    
 0.699
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.