STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05708Uncharacterized protein. (759 aa)    
Predicted Functional Partners:
SARC_08029
Sod_Cu domain-containing protein.
  
 0.960
SARC_05709
Uncharacterized protein.
 
     0.933
SARC_05278
Uncharacterized protein.
 
     0.933
SARC_11277
Uncharacterized protein; Belongs to the multicopper oxidase family.
  
 
 0.667
SARC_10174
PGA_cap domain-containing protein.
  
 
 0.667
SARC_06839
Uncharacterized protein.
  
 
 0.667
SARC_08922
Uncharacterized protein.
  
 
 0.640
SARC_12978
Uncharacterized protein.
  
 
 0.638
SARC_06841
Uncharacterized protein.
  
 
 0.638
SARC_08092
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.586
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.