STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05374SGNH_hydro domain-containing protein. (275 aa)    
Predicted Functional Partners:
SARC_01444
Uncharacterized protein.
  
 0.998
SARC_05492
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
    
 0.851
SARC_12213
Putative_PNPOx domain-containing protein.
    
 0.776
SARC_07443
Uncharacterized protein.
    
 0.756
SARC_07044
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.755
SARC_04806
Phos_pyr_kin domain-containing protein.
   
 0.734
SARC_04805
Pyridoxal kinase.
   
 0.734
SARC_00918
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.731
SARC_11887
Uncharacterized protein.
    
 0.723
SARC_09362
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.716
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.