STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05550Autophagy_act_C domain-containing protein. (249 aa)    
Predicted Functional Partners:
SARC_02650
Ubiquitin-like protein ATG12.
    
 0.935
SARC_05852
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.926
SARC_05851
Uncharacterized protein.
   
 0.886
SARC_10845
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.807
SARC_01506
Autophagy-related protein.
   
 0.616
SARC_00845
E2_bind domain-containing protein.
   
 0.611
SARC_18042
ThiF domain-containing protein.
   
 0.598
SARC_17677
Uncharacterized protein.
   
 0.598
SARC_17589
UBA_e1_thiolCys domain-containing protein.
   
 0.598
SARC_16955
Uncharacterized protein.
   
 0.598
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.