STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05294MHD domain-containing protein. (1068 aa)    
Predicted Functional Partners:
SARC_02443
DH domain-containing protein.
    
 0.999
SARC_00928
Uncharacterized protein.
    
 0.999
SARC_08653
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.957
SARC_09831
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
   
 0.947
SARC_12081
Uncharacterized protein.
   
 0.882
SARC_13148
Uncharacterized protein.
    
 0.855
SARC_00196
Uncharacterized protein.
    
 0.855
SARC_04513
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.826
SARC_05360
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.823
SARC_08333
DUF1681 domain-containing protein.
    
 0.816
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.