STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05882Uncharacterized protein. (807 aa)    
Predicted Functional Partners:
SARC_01902
Uncharacterized protein.
   
 0.978
SARC_11646
E2F_TDP domain-containing protein.
   
 0.975
SARC_12325
E2F_TDP domain-containing protein.
   
 0.973
SARC_09958
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.758
SARC_09238
BHLH domain-containing protein.
    
  0.748
SARC_06504
BHLH domain-containing protein.
    
  0.748
SARC_11916
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.740
SARC_02080
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.709
SARC_11950
Enhancer of polycomb-like protein.
    
 0.666
SARC_15786
Hist_deacetyl domain-containing protein.
   
  0.652
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.