STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_04830F-box domain-containing protein. (559 aa)    
Predicted Functional Partners:
SARC_01128
Serine/threonine-protein kinase PLK.
    
 0.817
SARC_11426
Malate synthase G.
   
 
 0.816
SARC_02426
ANK_REP_REGION domain-containing protein.
    
 0.795
SARC_01506
Autophagy-related protein.
    
  0.755
SARC_12612
Uncharacterized protein.
    
 0.695
SARC_02205
Methyl-accepting transducer domain-containing protein.
    
 0.695
SARC_02285
ANK_REP_REGION domain-containing protein.
    
 0.676
SARC_03014
ANK_REP_REGION domain-containing protein.
    
 0.664
SARC_17626
Uncharacterized protein.
    
 0.652
SARC_10045
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.652
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.