STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_05576Aldehyde dehydrogenase. (560 aa)    
Predicted Functional Partners:
SARC_11426
Malate synthase G.
  
 
 0.857
SARC_10433
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.835
SARC_04091
Citrate synthase; Belongs to the citrate synthase family.
  
 0.821
SARC_02563
Citrate synthase; Belongs to the citrate synthase family.
  
 0.821
SARC_08527
Acetyl-coenzyme A synthetase.
  
 0.816
SARC_03770
Acetyl-coenzyme A synthetase.
  
 0.816
SARC_09209
Uncharacterized protein.
   
 0.813
SARC_12977
Uncharacterized protein.
  
 0.807
SARC_02652
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.806
SARC_07106
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.796
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.