STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_04190Uncharacterized protein. (807 aa)    
Predicted Functional Partners:
SARC_01822
Uncharacterized protein.
    
 
 0.920
SARC_01420
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.901
SARC_14211
Uncharacterized protein.
   
 
 0.719
SARC_00382
RRM domain-containing protein.
   
 
 0.719
SARC_03087
CSTF_C domain-containing protein.
   
 
 0.713
SARC_04501
RRM domain-containing protein.
   
 
 0.712
SARC_13615
WHEP-TRS domain-containing protein.
   
    0.662
SARC_07554
Autophagy-related protein 3.
    
   0.545
SARC_08026
Importin N-terminal domain-containing protein.
   
  
 0.526
SARC_08499
Transportin-1.
   
 
 0.462
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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