STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_03758RRM domain-containing protein. (397 aa)    
Predicted Functional Partners:
SARC_00771
Uncharacterized protein.
    
 
 0.972
SARC_05209
Matrin-type domain-containing protein.
   
 
 0.962
SARC_11085
Uncharacterized protein.
   
 
 0.959
SARC_15820
Uncharacterized protein.
   
 0.952
SARC_03261
Uncharacterized protein.
   
 0.952
SARC_03167
Uncharacterized protein.
    
 
 0.950
SARC_03260
Uncharacterized protein.
   
 0.944
SARC_01497
Splicing factor 3B subunit 3.
    
 
 0.926
SARC_03888
Uncharacterized protein.
    
 
 0.907
SARC_06983
Pre-mRNA branch site protein p14.
    
 
 0.900
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.