STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_03161Aminotran_1_2 domain-containing protein. (524 aa)    
Predicted Functional Partners:
SARC_01115
Uncharacterized protein.
    
 0.907
SARC_03034
Aspartokinase; Belongs to the aspartokinase family.
 
 0.904
SARC_06777
Semialdhyde_dh domain-containing protein.
  
 
 0.870
SARC_12160
Aspartate aminotransferase.
   
 0.858
SARC_01116
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.835
SARC_09166
Aminotran_5 domain-containing protein.
  
 0.833
SARC_02648
Serine-glyoxylate transaminase.
  
 0.833
SARC_03596
FMN hydroxy acid dehydrogenase domain-containing protein.
  
 
 0.832
SARC_17997
Aminotran_1_2 domain-containing protein.
   
 0.827
SARC_10629
Aspartate aminotransferase.
   
 0.827
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.