SARC_03091 protein (Sphaeroforma arctica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SARC_03091

STE/STE20 protein kinase. (533 aa)

Predicted Functional Partners:

SARC_00758

0.899

SARC_02448

0.750

SARC_00008

0.725

SARC_02285

0.723

SARC_03014

0.708

SARC_05006

0.689

SARC_02788

0.679

SARC_02771

0.671

SARC_01151

0.653

SARC_04112

0.648

Your Current Organism:

Sphaeroforma arctica

NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SARC_00008	SARC_02448	A0A0L0GG77	A0A0L0G900	DUF3402 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.969
SARC_00008	SARC_03091	A0A0L0GG77	A0A0L0G740	DUF3402 domain-containing protein.	STE/STE20 protein kinase.	0.725
SARC_00758	SARC_03091	A0A0L0GDQ7	A0A0L0G740	Calcium-binding protein 39.	STE/STE20 protein kinase.	0.899
SARC_01151	SARC_02285	A0A0L0GCW4	A0A0L0G9D3	STE/STE11 protein kinase.	ANK_REP_REGION domain-containing protein.	0.599
SARC_01151	SARC_02788	A0A0L0GCW4	A0A0L0G7U5	STE/STE11 protein kinase.	STE/STE7/MEK1 protein kinase.	0.977
SARC_01151	SARC_03014	A0A0L0GCW4	A0A0L0G6W7	STE/STE11 protein kinase.	ANK_REP_REGION domain-containing protein.	0.604
SARC_01151	SARC_03091	A0A0L0GCW4	A0A0L0G740	STE/STE11 protein kinase.	STE/STE20 protein kinase.	0.653
SARC_01151	SARC_05006	A0A0L0GCW4	A0A0L0G0X4	STE/STE11 protein kinase.	STE/STE7 protein kinase; Belongs to the protein kinase superfamily.	0.977
SARC_02285	SARC_01151	A0A0L0G9D3	A0A0L0GCW4	ANK_REP_REGION domain-containing protein.	STE/STE11 protein kinase.	0.599
SARC_02285	SARC_02448	A0A0L0G9D3	A0A0L0G900	ANK_REP_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.470
SARC_02285	SARC_02788	A0A0L0G9D3	A0A0L0G7U5	ANK_REP_REGION domain-containing protein.	STE/STE7/MEK1 protein kinase.	0.659
SARC_02285	SARC_03014	A0A0L0G9D3	A0A0L0G6W7	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.812
SARC_02285	SARC_03091	A0A0L0G9D3	A0A0L0G740	ANK_REP_REGION domain-containing protein.	STE/STE20 protein kinase.	0.723
SARC_02285	SARC_05006	A0A0L0G9D3	A0A0L0G0X4	ANK_REP_REGION domain-containing protein.	STE/STE7 protein kinase; Belongs to the protein kinase superfamily.	0.659
SARC_02448	SARC_00008	A0A0L0G900	A0A0L0GG77	WD_REPEATS_REGION domain-containing protein.	DUF3402 domain-containing protein.	0.969
SARC_02448	SARC_02285	A0A0L0G900	A0A0L0G9D3	WD_REPEATS_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.470
SARC_02448	SARC_02771	A0A0L0G900	A0A0L0G7Z6	WD_REPEATS_REGION domain-containing protein.	T-complex protein 1 subunit theta.	0.855
SARC_02448	SARC_03014	A0A0L0G900	A0A0L0G6W7	WD_REPEATS_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.489
SARC_02448	SARC_03091	A0A0L0G900	A0A0L0G740	WD_REPEATS_REGION domain-containing protein.	STE/STE20 protein kinase.	0.750
SARC_02448	SARC_04112	A0A0L0G900	A0A0L0G4B3	WD_REPEATS_REGION domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.885