STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_03720Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (249 aa)    
Predicted Functional Partners:
SARC_07951
Mannose-1-phosphate guanyltransferase beta.
  
 
 0.931
SARC_07044
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.916
SARC_11420
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.911
SARC_04538
Coronin; Belongs to the WD repeat coronin family.
    
 0.888
SARC_00723
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
    
 0.884
SARC_12582
Fructose-bisphosphate aldolase class 2.
    
 0.861
SARC_07449
Flavokinase domain-containing protein.
   
 0.842
SARC_02272
Uncharacterized protein.
    
 0.836
SARC_14767
NTP_transferase domain-containing protein.
  
 
 0.823
SARC_14849
Uncharacterized protein.
  
 
 0.823
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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