STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_02807Uncharacterized protein. (330 aa)    
Predicted Functional Partners:
SARC_11256
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.898
SARC_17196
Xpo1 domain-containing protein.
   
 0.687
SARC_13685
Uncharacterized protein.
   
 0.687
SARC_05173
Exportin-1.
   
 0.687
SARC_16366
Uncharacterized protein.
    
 0.656
SARC_10441
Uncharacterized protein.
    
 0.656
SARC_09921
SANT_DAMP1_like domain-containing protein.
    
 
 0.636
SARC_01519
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
    0.588
SARC_12349
Uncharacterized protein.
    
 
 0.447
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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