STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_02840NDK domain-containing protein; Belongs to the NDK family. (217 aa)    
Predicted Functional Partners:
SARC_01357
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.984
SARC_11056
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
  0.981
SARC_13844
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 0.980
SARC_14418
Ribosomal_S10 domain-containing protein.
   
  0.979
SARC_04030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.977
SARC_13426
Uncharacterized protein.
  
 0.975
SARC_09487
Uncharacterized protein.
   
 0.974
SARC_02351
30S ribosomal protein S6.
   
  0.974
SARC_06142
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
  0.969
SARC_11011
Ribosomal_S5_C domain-containing protein.
  
  0.968
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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