SARC_02487 protein (Sphaeroforma arctica) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

SARC_02487

Uncharacterized protein. (145 aa)

Predicted Functional Partners:

SARC_06344

0.978

SARC_00896

0.977

SARC_15758

0.971

SARC_01366

0.966

SARC_02507

0.964

SARC_11585

0.959

SARC_03441

0.959

SARC_15709

0.936

SARC_10286

0.936

SARC_13561

0.928

Your Current Organism:

Sphaeroforma arctica

NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SARC_00896	SARC_01366	A0A0L0GD58	A0A0L0GBX6	Uncharacterized protein.	Uncharacterized protein.	0.988
SARC_00896	SARC_02487	A0A0L0GD58	A0A0L0G8K7	Uncharacterized protein.	Uncharacterized protein.	0.977
SARC_00896	SARC_02507	A0A0L0GD58	A0A0L0G8J5	Uncharacterized protein.	Cog4 domain-containing protein.	0.995
SARC_00896	SARC_03441	A0A0L0GD58	A0A0L0G652	Uncharacterized protein.	Uncharacterized protein.	0.984
SARC_00896	SARC_06344	A0A0L0GD58	A0A0L0FWV5	Uncharacterized protein.	Uncharacterized protein.	0.995
SARC_00896	SARC_10286	A0A0L0GD58	A0A0L0FL96	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.985
SARC_00896	SARC_11585	A0A0L0GD58	A0A0L0FGK1	Uncharacterized protein.	Uncharacterized protein.	0.984
SARC_00896	SARC_13561	A0A0L0GD58	A0A0L0FAU4	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.979
SARC_00896	SARC_15709	A0A0L0GD58	A0A0L0F4U5	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.985
SARC_00896	SARC_15758	A0A0L0GD58	A0A0L0F4S6	Uncharacterized protein.	Uncharacterized protein.	0.995
SARC_01366	SARC_00896	A0A0L0GBX6	A0A0L0GD58	Uncharacterized protein.	Uncharacterized protein.	0.988
SARC_01366	SARC_02487	A0A0L0GBX6	A0A0L0G8K7	Uncharacterized protein.	Uncharacterized protein.	0.966
SARC_01366	SARC_02507	A0A0L0GBX6	A0A0L0G8J5	Uncharacterized protein.	Cog4 domain-containing protein.	0.994
SARC_01366	SARC_03441	A0A0L0GBX6	A0A0L0G652	Uncharacterized protein.	Uncharacterized protein.	0.974
SARC_01366	SARC_06344	A0A0L0GBX6	A0A0L0FWV5	Uncharacterized protein.	Uncharacterized protein.	0.994
SARC_01366	SARC_10286	A0A0L0GBX6	A0A0L0FL96	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.970
SARC_01366	SARC_11585	A0A0L0GBX6	A0A0L0FGK1	Uncharacterized protein.	Uncharacterized protein.	0.974
SARC_01366	SARC_13561	A0A0L0GBX6	A0A0L0FAU4	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.966
SARC_01366	SARC_15709	A0A0L0GBX6	A0A0L0F4U5	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.970
SARC_01366	SARC_15758	A0A0L0GBX6	A0A0L0F4S6	Uncharacterized protein.	Uncharacterized protein.	0.995

page 1 of 6

Network Stats

number of nodes:

11

number of edges:

54

average node degree:

9.82

avg. local clustering coefficient:

0.982

expected number of edges:

15

PPI enrichment p-value:

4.66e-15

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006166

Purine ribonucleoside salvage

2 of 4

2.65

1.0

0.0155

GO:0055086

Nucleobase-containing small molecule metabolic process

5 of 210

1.32

0.89

0.0074

GO:0072522

Purine-containing compound biosynthetic process

3 of 68

1.59

0.85

0.0182

GO:0009168

Purine ribonucleoside monophosphate biosynthetic process

2 of 17

2.02

0.83

0.0280

GO:1901137

Carbohydrate derivative biosynthetic process

4 of 222

1.2

0.72

0.0182

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:13127

Metabolism of nucleotides, and Purine nucleoside catabolic process

7 of 78

1.9

3.59

1.73e-09

CL:13128

Nucleoside monophosphate metabolic process, and Nucleoside-triphosphate diphosphatase activity

5 of 48

1.96

2.75

1.06e-06

CL:13129

Purine ribonucleoside monophosphate biosynthesis, and Adenosine deaminase domain

3 of 24

2.04

1.47

0.0014

CL:13239

Cytidine and deoxycytidylate deaminase zinc-binding region, and Bacterial bifunctional deaminase-reductase, C-terminal

2 of 5

2.55

1.13

0.0088

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00230

Purine metabolism

3 of 98

1.43

0.75

0.0250

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00383

Cytidine and deoxycytidylate deaminase zinc-binding region

2 of 7

2.4

0.76

0.0416

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