STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_02462NmrA domain-containing protein. (75 aa)    
Predicted Functional Partners:
SARC_05259
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.993
SARC_03529
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.964
SARC_03499
40S ribosomal protein S11.
   
 0.960
SARC_12333
S10_plectin domain-containing protein.
   
 0.959
SARC_04638
40S ribosomal protein S20.
   
 0.957
SARC_07212
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.954
SARC_07853
40S ribosomal protein S3-B.
   
 0.953
SARC_01565
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.952
SARC_11846
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.951
SARC_09985
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.951
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.