STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_02413GMC_OxRdtase_N domain-containing protein. (309 aa)    
Predicted Functional Partners:
SARC_02414
GMC_oxred_C domain-containing protein.
 
     0.951
SARC_05372
Sulfatase domain-containing protein.
    
 0.683
SARC_07629
Uncharacterized protein.
   
 
 0.651
SARC_00057
Uncharacterized protein.
    
 0.627
SARC_00189
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.621
SARC_07044
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
  0.605
SARC_10798
2Fe-2S ferredoxin-type domain-containing protein.
     
 0.601
SARC_04788
2Fe-2S ferredoxin-type domain-containing protein.
     
 0.601
SARC_10847
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
     
 0.600
SARC_15041
RING-type domain-containing protein.
    
  0.595
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.