STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_02185MFS domain-containing protein. (435 aa)    
Predicted Functional Partners:
SARC_15435
Uncharacterized protein.
     
 0.721
SARC_06199
PCI domain-containing protein.
     
 0.721
SARC_02089
Glyco_tran_28_C domain-containing protein.
     
 0.700
SARC_16388
NodB homology domain-containing protein.
     
 0.682
SARC_05473
Uncharacterized protein.
     
 0.682
SARC_10364
TK protein kinase.
    
  0.677
SARC_03040
TK protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.677
SARC_12275
Peptidase_M28 domain-containing protein.
     
 0.676
SARC_06827
Peptidase_M28 domain-containing protein.
     
 0.676
SARC_05435
Uncharacterized protein.
     
 0.676
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.