STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_01674Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1060 aa)    
Predicted Functional Partners:
SARC_13615
WHEP-TRS domain-containing protein.
  
 0.999
SARC_17368
tRNA-synt_1g domain-containing protein.
  
 0.995
SARC_06684
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.995
SARC_12681
Elongation factor EF-1 alpha subunit.
   
 0.991
SARC_06836
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.968
SARC_18318
tRNA-synt_1 domain-containing protein.
  
 0.947
SARC_13835
tRNA-synt_1 domain-containing protein.
  
 0.947
SARC_10766
Uncharacterized protein.
  
0.947
SARC_06519
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.942
SARC_02134
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.928
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.