STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_01715Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (339 aa)    
Predicted Functional Partners:
SARC_06706
Uncharacterized protein.
   
 
 0.724
SARC_17794
3Beta_HSD domain-containing protein.
     
 0.717
SARC_05170
Uncharacterized protein.
     
 0.717
SARC_11773
Aldo_ket_red domain-containing protein.
   
 
 0.714
SARC_09743
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
0.708
SARC_10272
Estradiol 17-beta-dehydrogenase 8.
  
  
0.707
SARC_02903
SAM domain-containing protein.
   
 0.705
SARC_07487
Uncharacterized protein.
  
 
 0.704
SARC_13055
Hydroxymethylglutaryl-CoA lyase, mitochondrial.
     
 0.702
SARC_07448
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
0.702
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.