STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_01538TauD domain-containing protein. (367 aa)    
Predicted Functional Partners:
SARC_08917
Cytochrome b5 heme-binding domain-containing protein.
   
 0.745
SARC_09376
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.725
SARC_05112
Uncharacterized protein.
  
 
 0.725
SARC_06571
Uncharacterized protein.
     
 0.714
SARC_07176
Uncharacterized protein.
     
 0.712
SARC_10433
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
    
 0.701
SARC_07203
Flavodoxin-like domain-containing protein.
     
 0.672
SARC_14675
FMN_red domain-containing protein.
  
 
  0.668
SARC_01279
FMN_red domain-containing protein.
  
 
  0.668
SARC_05179
Uncharacterized protein.
    
 0.664
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.