STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_016132OG-FeII_Oxy_2 domain-containing protein. (211 aa)    
Predicted Functional Partners:
SARC_00374
JmjC domain-containing protein.
    
 0.986
SARC_06916
Methyl-accepting transducer domain-containing protein.
   
 0.984
SARC_10180
Histone H2A; Belongs to the histone H2A family.
   
 0.968
SARC_00855
Uncharacterized protein.
   
 0.960
SARC_03993
Uncharacterized protein.
   
 
 0.955
SARC_15641
Uncharacterized protein.
    
 0.947
SARC_02584
PHD-type domain-containing protein.
    
 0.946
SARC_10886
Ubiquitin-40S ribosomal protein S27a.
   
 0.923
SARC_11243
RuvB-like helicase.
    
 0.919
SARC_15685
Uncharacterized protein.
   
  0.918
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.