STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_00926Triosephosphate isomerase. (247 aa)    
Predicted Functional Partners:
SARC_10611
Phosphoglycerate kinase.
 
 0.998
SARC_09805
Glyceraldehyde 3-phosphate dehydrogenase domain-containing protein.
 
 0.993
SARC_04109
Enolase.
  
 0.993
SARC_09806
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.992
SARC_13489
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.991
SARC_09691
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.991
SARC_02270
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.991
SARC_12922
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.990
SARC_12517
Uncharacterized protein.
  
 0.989
SARC_12582
Fructose-bisphosphate aldolase class 2.
  
 
 0.989
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.