STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_01555Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
SARC_04595
Uncharacterized protein.
   
  
 0.512
SARC_04594
ABC transporter domain-containing protein.
   
  
 0.512
SARC_01071
Uncharacterized protein.
   
    0.478
SARC_01148
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  
 0.442
SARC_05255
WD_REPEATS_REGION domain-containing protein.
   
    0.440
SARC_08169
PUM-HD domain-containing protein.
   
    0.436
SARC_10096
Uncharacterized protein.
     
 0.428
SARC_02721
Uncharacterized protein.
     
 0.428
SARC_07454
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
    0.426
SARC_01143
Bms1-type G domain-containing protein.
   
    0.426
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
Server load: low (16%) [HD]