Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SARC_00510 | SARC_04069 | A0A0L0GEQ7 | A0A0L0G4C8 | SET domain-containing protein. | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | 0.722 |
SARC_00510 | SARC_04740 | A0A0L0GEQ7 | A0A0L0G1H5 | SET domain-containing protein. | Ubiquitin-60S ribosomal protein L40, variant. | 0.708 |
SARC_00510 | SARC_04797 | A0A0L0GEQ7 | A0A0L0G1F4 | SET domain-containing protein. | Uncharacterized protein. | 0.734 |
SARC_00510 | SARC_04801 | A0A0L0GEQ7 | A0A0L0G179 | SET domain-containing protein. | Uncharacterized protein. | 0.771 |
SARC_00510 | SARC_05279 | A0A0L0GEQ7 | A0A0L0G0Q1 | SET domain-containing protein. | SET domain-containing protein. | 0.727 |
SARC_00510 | SARC_05371 | A0A0L0GEQ7 | A0A0L0FZQ2 | SET domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.673 |
SARC_00510 | SARC_08239 | A0A0L0GEQ7 | A0A0L0FRH4 | SET domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.705 |
SARC_00510 | SARC_09709 | A0A0L0GEQ7 | A0A0L0FM60 | SET domain-containing protein. | Uncharacterized protein. | 0.732 |
SARC_00510 | SARC_10180 | A0A0L0GEQ7 | A0A0L0FI70 | SET domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.703 |
SARC_00510 | SARC_16790 | A0A0L0GEQ7 | A0A0L0F1U6 | SET domain-containing protein. | Uncharacterized protein. | 0.673 |
SARC_04069 | SARC_00510 | A0A0L0G4C8 | A0A0L0GEQ7 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | SET domain-containing protein. | 0.722 |
SARC_04069 | SARC_04740 | A0A0L0G4C8 | A0A0L0G1H5 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | Ubiquitin-60S ribosomal protein L40, variant. | 0.885 |
SARC_04069 | SARC_05279 | A0A0L0G4C8 | A0A0L0G0Q1 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | SET domain-containing protein. | 0.932 |
SARC_04069 | SARC_08239 | A0A0L0G4C8 | A0A0L0FRH4 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.967 |
SARC_04069 | SARC_09709 | A0A0L0G4C8 | A0A0L0FM60 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | Uncharacterized protein. | 0.714 |
SARC_04069 | SARC_10180 | A0A0L0G4C8 | A0A0L0FI70 | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | Histone H2A; Belongs to the histone H2A family. | 0.929 |
SARC_04740 | SARC_00510 | A0A0L0G1H5 | A0A0L0GEQ7 | Ubiquitin-60S ribosomal protein L40, variant. | SET domain-containing protein. | 0.708 |
SARC_04740 | SARC_04069 | A0A0L0G1H5 | A0A0L0G4C8 | Ubiquitin-60S ribosomal protein L40, variant. | Histone-lysine N-methyltransferase, H3 lysine-79 specific. | 0.885 |
SARC_04740 | SARC_04797 | A0A0L0G1H5 | A0A0L0G1F4 | Ubiquitin-60S ribosomal protein L40, variant. | Uncharacterized protein. | 0.676 |
SARC_04740 | SARC_04801 | A0A0L0G1H5 | A0A0L0G179 | Ubiquitin-60S ribosomal protein L40, variant. | Uncharacterized protein. | 0.755 |
page 1 of 5