SARC_00685 protein (Sphaeroforma arctica) - STRING interaction network

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Score

SARC_00685

Uncharacterized protein. (752 aa)

Predicted Functional Partners:

SARC_18043

0.983

LSM8

0.983

SARC_08799

0.980

LSM4

0.980

SARC_09974

0.943

SARC_01718

0.943

SARC_12379

0.907

SARC_02873

0.853

SARC_06362

0.799

SARC_09429

0.749

Your Current Organism:

Sphaeroforma arctica

NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	LSM8	A0A0L0GFT5	A0A0L0FF96	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LSM4	SARC_00685	A0A0L0GFT5	A0A0L0GFZ7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.980
LSM4	SARC_01718	A0A0L0GFT5	A0A0L0GB76	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.984
LSM4	SARC_02873	A0A0L0GFT5	A0A0L0G7M1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Bin3-type SAM domain-containing protein.	0.462
LSM4	SARC_08799	A0A0L0GFT5	A0A0L0FPY9	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm7.	0.997
LSM4	SARC_09429	A0A0L0GFT5	A0A0L0FMZ1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.964
LSM4	SARC_09974	A0A0L0GFT5	A0A0L0FM83	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.984
LSM4	SARC_12379	A0A0L0GFT5	A0A0L0FEA5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP3 domain-containing protein.	0.981
LSM4	SARC_18043	A0A0L0GFT5	A0A0L0EYE4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.997
LSM8	LSM4	A0A0L0FF96	A0A0L0GFT5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LSM8	SARC_00685	A0A0L0FF96	A0A0L0GFZ7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.983
LSM8	SARC_01718	A0A0L0FF96	A0A0L0GB76	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.985
LSM8	SARC_08799	A0A0L0FF96	A0A0L0FPY9	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm7.	0.994
LSM8	SARC_09429	A0A0L0FF96	A0A0L0FMZ1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.978
LSM8	SARC_09974	A0A0L0FF96	A0A0L0FM83	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.985
LSM8	SARC_12379	A0A0L0FF96	A0A0L0FEA5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	PRP3 domain-containing protein.	0.992
LSM8	SARC_18043	A0A0L0FF96	A0A0L0EYE4	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.996
SARC_00685	LSM4	A0A0L0GFZ7	A0A0L0GFT5	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.980
SARC_00685	LSM8	A0A0L0GFZ7	A0A0L0FF96	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.983
SARC_00685	SARC_01718	A0A0L0GFZ7	A0A0L0GB76	Uncharacterized protein.	Uncharacterized protein.	0.943