STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfT_1Energy-coupling factor transporter transmembrane protein EcfT. (247 aa)    
Predicted Functional Partners:
ykoD_1
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.993
bioY
Biotin transporter BioY.
  
 0.984
ykoD_3
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.971
ykoD_4
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.962
ykoD_2
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.954
KZX14290.1
Hypothetical protein.
 
     0.929
metN
Methionine import ATP-binding protein MetN.
  
 0.920
glnQ
Glutamine transport ATP-binding protein GlnQ.
  
 0.920
ecfA3_1
Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.918
ecfA3_2
Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.918
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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