Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZX14290.1 | ecfT_1 | MBORA_00640 | MBORA_00630 | Hypothetical protein. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.929 |
KZX14290.1 | ykoD_1 | MBORA_00640 | MBORA_00620 | Hypothetical protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.928 |
KZX14290.1 | ykoD_3 | MBORA_00640 | MBORA_17620 | Hypothetical protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.692 |
KZX14290.1 | ykoD_4 | MBORA_00640 | MBORA_18410 | Hypothetical protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.425 |
bioY | ecfA3_1 | MBORA_12030 | MBORA_10390 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.927 |
bioY | ecfA3_2 | MBORA_12030 | MBORA_13370 | Biotin transporter BioY. | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.927 |
bioY | ecfT_1 | MBORA_12030 | MBORA_00630 | Biotin transporter BioY. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.984 |
bioY | glnQ | MBORA_12030 | MBORA_19120 | Biotin transporter BioY. | Glutamine transport ATP-binding protein GlnQ. | 0.428 |
bioY | metN | MBORA_12030 | MBORA_01480 | Biotin transporter BioY. | Methionine import ATP-binding protein MetN. | 0.428 |
bioY | ykoD_1 | MBORA_12030 | MBORA_00620 | Biotin transporter BioY. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.918 |
bioY | ykoD_2 | MBORA_12030 | MBORA_06390 | Biotin transporter BioY. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.918 |
bioY | ykoD_3 | MBORA_12030 | MBORA_17620 | Biotin transporter BioY. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.918 |
bioY | ykoD_4 | MBORA_12030 | MBORA_18410 | Biotin transporter BioY. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.918 |
ecfA3_1 | bioY | MBORA_10390 | MBORA_12030 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Biotin transporter BioY. | 0.927 |
ecfA3_1 | ecfA3_2 | MBORA_10390 | MBORA_13370 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.958 |
ecfA3_1 | ecfT_1 | MBORA_10390 | MBORA_00630 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.918 |
ecfA3_1 | glnQ | MBORA_10390 | MBORA_19120 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Glutamine transport ATP-binding protein GlnQ. | 0.682 |
ecfA3_1 | metN | MBORA_10390 | MBORA_01480 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Methionine import ATP-binding protein MetN. | 0.695 |
ecfA3_2 | bioY | MBORA_13370 | MBORA_12030 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Biotin transporter BioY. | 0.927 |
ecfA3_2 | ecfA3_1 | MBORA_13370 | MBORA_10390 | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | Energy-coupling factor transporter ATP-binding protein EcfA3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.958 |
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