STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhF_2Formate dehydrogenase H. (458 aa)    
Predicted Functional Partners:
nuoI_1
NADH-quinone oxidoreductase subunit I.
 
  0.999
ndhI_1
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
   
  0.999
KZX13910.1
Molybdopterin dinucleotide binding domain protein.
   
 0.999
fhcA
Formyltransferase/hydrolase complex Fhc subunit A.
 
 0.999
fhcC
Formyltransferase/hydrolase complex Fhc subunit C.
 
 0.999
fhcD_1
Formyltransferase/hydrolase complex subunit D.
 
 
 0.999
fhcD_2
Formyltransferase/hydrolase complex subunit D; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
 
 0.999
KZX12848.1
H(2)-dependent methylenetetrahydromethanopterin dehydrogenase.
      
 0.999
nuoI_2
NADH-quinone oxidoreductase subunit I.
 
  0.996
KZX10910.1
Putative formate dehydrogenase.
 
  0.996
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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