Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (188 aa)    
Predicted Functional Partners:
rmlD
dTDP-4-dehydrorhamnose reductase.
 
 0.999
rffG
dTDP-glucose 4,6-dehydratase 2.
 
 
 0.999
rmlA1
Glucose-1-phosphate thymidylyltransferase 1.
 
 
 0.989
rfbB
dTDP-glucose 4,6-dehydratase.
  
 
 0.968
KZX14072.1
Hypothetical protein.
     
  0.926
ywqF
UDP-glucose 6-dehydrogenase YwqF.
  
 
 0.822
glf
UDP-galactopyranose mutase.
  
  
 0.815
KZX13381.1
UDP-glucose 4-epimerase.
  
 
 0.790
pphA
Phosphonopyruvate hydrolase.
    
  0.692
tagO
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
     
 0.654
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.