STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgcG_12-amino-4-deoxychorismate dehydrogenase. (194 aa)    
Predicted Functional Partners:
KZX13646.1
Iron-sulfur flavoprotein.
  
    0.689
spoVB
Stage V sporulation protein B.
       0.615
tarI
Putative ribitol-5-phosphate cytidylyltransferase.
  
  
 0.558
smc_2
Chromosome partition protein Smc.
       0.543
fprA_1
Nitric oxide reductase.
 
 
 0.536
fprA_2
Nitric oxide reductase.
 
 
 0.529
KZX10884.1
Hypothetical protein.
   
    0.497
cysC
Adenylyl-sulfate kinase.
  
   
 0.477
KZX14180.1
Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase.
     
 0.410
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.