Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaIAcyl-coenzyme A thioesterase PaaI. (134 aa)    
Predicted Functional Partners:
KZX14047.1
Phenylacetate-coenzyme A ligase.
 
 
 0.974
KZX12480.1
Phenylacetate-coenzyme A ligase.
 
 
 0.974
tarI
Putative ribitol-5-phosphate cytidylyltransferase.
  
  
 0.804
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.719
KZX12554.1
X-Pro dipeptidyl-peptidase S15 family.
    
 0.668
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
  
 0.601
aldHT
Aldehyde dehydrogenase, thermostable.
    
 0.600
cysE
Serine acetyltransferase.
  
 
 0.597
KZX11290.1
Hypothetical protein.
  
 
 0.573
KZX12387.1
2-oxoglutaramate amidase.
  
 
  0.548
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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