STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgBPutative 3-hydroxybutyryl-CoA dehydrogenase. (312 aa)    
Predicted Functional Partners:
pcaF
beta-ketoadipyl-CoA thiolase.
  
 0.999
acsA
Acetyl-coenzyme A synthetase.
  
 
 0.971
pqsD
PQB biosynthetic 3-oxoacyl-[acyl-carrier-protein] synthase III; Belongs to the thiolase-like superfamily. UPF0219 family.
    
 0.949
sucD_1
succinyl-CoA ligase [ADP-forming] subunit alpha.
  
 
  0.947
porB
Pyruvate synthase subunit PorB.
     
 0.945
porA
Pyruvate synthase subunit PorA.
     
 0.941
porD
Pyruvate synthase subunit PorD.
     
 0.940
padE
NADH-dependent phenylglyoxylate dehydrogenase subunit gamma.
     
 0.940
aldHT
Aldehyde dehydrogenase, thermostable.
 
 0.900
tarI
Putative ribitol-5-phosphate cytidylyltransferase.
  
 0.825
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.