Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KZX13541.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
KZX13542.1
Hypothetical protein; Belongs to the UPF0288 family.
  
    0.929
fldI
R-phenyllactate dehydratase activator.
       0.917
KZX13540.1
Hypothetical protein.
       0.917
KZX13538.1
Hypothetical protein.
       0.837
nifB
FeMo cofactor biosynthesis protein NifB.
       0.626
hjc
Archaeal holliday junction resolvase hjc; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
  
    0.625
KZX10521.1
Methyl-coenzyme M reductase operon protein C.
       0.577
nucH
Thermonuclease precursor.
       0.535
pacS
Putative copper-transporting ATPase PacS.
       0.433
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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