Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZX10486.1 | KZX10858.1 | MBORA_18170 | MBORA_16950 | Putative snoRNA binding domain protein. | Hypothetical protein. | 0.484 |
KZX10486.1 | KZX13230.1 | MBORA_18170 | MBORA_07800 | Putative snoRNA binding domain protein. | Hypothetical protein; Belongs to the PDCD5 family. | 0.518 |
KZX10486.1 | KZX13408.1 | MBORA_18170 | MBORA_06360 | Putative snoRNA binding domain protein. | peptidyl-tRNA hydrolase. | 0.549 |
KZX10486.1 | pelA | MBORA_18170 | MBORA_15280 | Putative snoRNA binding domain protein. | Peptide chain release factor 1; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. | 0.627 |
KZX10486.1 | rpoD | MBORA_18170 | MBORA_17320 | Putative snoRNA binding domain protein. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |
KZX10858.1 | KZX10486.1 | MBORA_16950 | MBORA_18170 | Hypothetical protein. | Putative snoRNA binding domain protein. | 0.484 |
KZX10858.1 | KZX13230.1 | MBORA_16950 | MBORA_07800 | Hypothetical protein. | Hypothetical protein; Belongs to the PDCD5 family. | 0.621 |
KZX10858.1 | KZX13408.1 | MBORA_16950 | MBORA_06360 | Hypothetical protein. | peptidyl-tRNA hydrolase. | 0.511 |
KZX10858.1 | rpoD | MBORA_16950 | MBORA_17320 | Hypothetical protein. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.559 |
KZX13230.1 | KZX10486.1 | MBORA_07800 | MBORA_18170 | Hypothetical protein; Belongs to the PDCD5 family. | Putative snoRNA binding domain protein. | 0.518 |
KZX13230.1 | KZX10858.1 | MBORA_07800 | MBORA_16950 | Hypothetical protein; Belongs to the PDCD5 family. | Hypothetical protein. | 0.621 |
KZX13230.1 | KZX13406.1 | MBORA_07800 | MBORA_06340 | Hypothetical protein; Belongs to the PDCD5 family. | Hypothetical protein. | 0.755 |
KZX13230.1 | KZX13408.1 | MBORA_07800 | MBORA_06360 | Hypothetical protein; Belongs to the PDCD5 family. | peptidyl-tRNA hydrolase. | 0.583 |
KZX13230.1 | ef1b | MBORA_07800 | MBORA_06330 | Hypothetical protein; Belongs to the PDCD5 family. | Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.852 |
KZX13230.1 | rpoD | MBORA_07800 | MBORA_17320 | Hypothetical protein; Belongs to the PDCD5 family. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.419 |
KZX13406.1 | KZX13230.1 | MBORA_06340 | MBORA_07800 | Hypothetical protein. | Hypothetical protein; Belongs to the PDCD5 family. | 0.755 |
KZX13406.1 | KZX13408.1 | MBORA_06340 | MBORA_06360 | Hypothetical protein. | peptidyl-tRNA hydrolase. | 0.678 |
KZX13406.1 | ef1b | MBORA_06340 | MBORA_06330 | Hypothetical protein. | Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.980 |
KZX13406.1 | pyrH | MBORA_06340 | MBORA_06350 | Hypothetical protein. | Uridylate kinase. | 0.883 |
KZX13408.1 | KZX10486.1 | MBORA_06360 | MBORA_18170 | peptidyl-tRNA hydrolase. | Putative snoRNA binding domain protein. | 0.549 |
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