STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
impdh_1Inosine-5'-monophosphate dehydrogenase. (211 aa)    
Predicted Functional Partners:
ndhI_3
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
     0.899
KZX13365.1
Ferredoxin.
 
     0.839
ydhX
Putative ferredoxin-like protein YdhX precursor.
 
     0.750
nuoH
NADH-quinone oxidoreductase subunit H.
 
   
 0.750
nqo4
NADH-quinone oxidoreductase subunit 4; Belongs to the complex I 49 kDa subunit family.
     
 0.624
hycG_1
Formate hydrogenlyase subunit 7.
     
 0.617
KZX13369.1
Hypothetical protein.
       0.602
fer
Ferredoxin.
  
     0.588
iolC
5-dehydro-2-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
       0.582
fhcD_1
Formyltransferase/hydrolase complex subunit D.
       0.582
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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