STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsAAcetyl-coenzyme A synthetase. (555 aa)    
Predicted Functional Partners:
fhcD_1
Formyltransferase/hydrolase complex subunit D.
      
 0.996
KZX13384.1
DNA-binding transcriptional repressor PuuR.
 
 0.993
pcaF
beta-ketoadipyl-CoA thiolase.
  
 
 0.985
sucD_1
succinyl-CoA ligase [ADP-forming] subunit alpha.
    
 0.984
pphA
Phosphonopyruvate hydrolase.
  
 
 0.977
aldHT
Aldehyde dehydrogenase, thermostable.
  
 0.976
accC
Biotin carboxylase.
 
 0.973
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.972
leuA_1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.971
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.971
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.