Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cat3 | minD | MBORA_08140 | MBORA_08160 | Chloramphenicol acetyltransferase 3. | Septum site-determining protein MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.509 |
cat3 | nasB | MBORA_08140 | MBORA_08150 | Chloramphenicol acetyltransferase 3. | Assimilatory nitrate reductase electron transfer subunit. | 0.606 |
minD | cat3 | MBORA_08160 | MBORA_08140 | Septum site-determining protein MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Chloramphenicol acetyltransferase 3. | 0.509 |
minD | nasB | MBORA_08160 | MBORA_08150 | Septum site-determining protein MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Assimilatory nitrate reductase electron transfer subunit. | 0.718 |
nasB | cat3 | MBORA_08150 | MBORA_08140 | Assimilatory nitrate reductase electron transfer subunit. | Chloramphenicol acetyltransferase 3. | 0.606 |
nasB | minD | MBORA_08150 | MBORA_08160 | Assimilatory nitrate reductase electron transfer subunit. | Septum site-determining protein MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.718 |