STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasBAssimilatory nitrate reductase electron transfer subunit. (443 aa)    
Predicted Functional Partners:
aiiA
N-acyl homoserine lactonase.
   
 0.999
fdhF_1
Formate dehydrogenase H.
   
 0.946
fprA_1
Nitric oxide reductase.
    
 0.926
fprA_2
Nitric oxide reductase.
    
 0.926
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.909
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.909
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
  
 0.894
hrb
High molecular weight rubredoxin.
  
 
 0.882
KZX12282.1
2,6-dihydropseudooxynicotine hydrolase.
  
 
 0.874
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.861
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.