Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZX10887.1 | KZX12949.1 | MBORA_17240 | MBORA_09920 | 50S ribosomal protein L14e. | Calcineurin-like phosphoesterase. | 0.842 |
KZX10887.1 | dnaK_1 | MBORA_17240 | MBORA_09930 | 50S ribosomal protein L14e. | Chaperone protein DnaK. | 0.784 |
KZX10887.1 | dnaK_2 | MBORA_17240 | MBORA_10450 | 50S ribosomal protein L14e. | Chaperone protein DnaK; Acts as a chaperone. | 0.784 |
KZX10887.1 | pnp_2 | MBORA_17240 | MBORA_14310 | 50S ribosomal protein L14e. | Polyribonucleotide nucleotidyltransferase; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.552 |
KZX10887.1 | rplC | MBORA_17240 | MBORA_16960 | 50S ribosomal protein L14e. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
KZX12282.1 | KZX12949.1 | MBORA_12590 | MBORA_09920 | 2,6-dihydropseudooxynicotine hydrolase. | Calcineurin-like phosphoesterase. | 0.914 |
KZX12947.1 | KZX12949.1 | MBORA_09900 | MBORA_09920 | Lipoprotein NlpI. | Calcineurin-like phosphoesterase. | 0.843 |
KZX12947.1 | dnaK_1 | MBORA_09900 | MBORA_09930 | Lipoprotein NlpI. | Chaperone protein DnaK. | 0.965 |
KZX12947.1 | dnaK_2 | MBORA_09900 | MBORA_10450 | Lipoprotein NlpI. | Chaperone protein DnaK; Acts as a chaperone. | 0.908 |
KZX12947.1 | rapA | MBORA_09900 | MBORA_14800 | Lipoprotein NlpI. | RNA polymerase-associated protein RapA. | 0.583 |
KZX12947.1 | stkP | MBORA_09900 | MBORA_09960 | Lipoprotein NlpI. | Serine/threonine-protein kinase StkP. | 0.935 |
KZX12949.1 | KZX10887.1 | MBORA_09920 | MBORA_17240 | Calcineurin-like phosphoesterase. | 50S ribosomal protein L14e. | 0.842 |
KZX12949.1 | KZX12282.1 | MBORA_09920 | MBORA_12590 | Calcineurin-like phosphoesterase. | 2,6-dihydropseudooxynicotine hydrolase. | 0.914 |
KZX12949.1 | KZX12947.1 | MBORA_09920 | MBORA_09900 | Calcineurin-like phosphoesterase. | Lipoprotein NlpI. | 0.843 |
KZX12949.1 | dnaK_1 | MBORA_09920 | MBORA_09930 | Calcineurin-like phosphoesterase. | Chaperone protein DnaK. | 0.951 |
KZX12949.1 | dnaK_2 | MBORA_09920 | MBORA_10450 | Calcineurin-like phosphoesterase. | Chaperone protein DnaK; Acts as a chaperone. | 0.834 |
KZX12949.1 | eno | MBORA_09920 | MBORA_17380 | Calcineurin-like phosphoesterase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.835 |
KZX12949.1 | pnp_2 | MBORA_09920 | MBORA_14310 | Calcineurin-like phosphoesterase. | Polyribonucleotide nucleotidyltransferase; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family. | 0.903 |
KZX12949.1 | rapA | MBORA_09920 | MBORA_14800 | Calcineurin-like phosphoesterase. | RNA polymerase-associated protein RapA. | 0.865 |
KZX12949.1 | rplC | MBORA_09920 | MBORA_16960 | Calcineurin-like phosphoesterase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.878 |
page 1 of 4