STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic. (271 aa)    
Predicted Functional Partners:
ilvB_1
Acetolactate synthase isozyme 1 large subunit.
      
 0.999
KZX12898.1
Methyl-coenzyme M reductase operon protein D.
   
 
 0.999
hoxH_1
NAD-reducing hydrogenase HoxS subunit beta; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
KZX11896.1
Hydrogenase 3 maturation protease.
 
 
 0.999
KZX11898.1
Coenzyme F420-reducing hydrogenase subunit beta.
 0.999
KZX10525.1
Methyl-coenzyme M reductase operon protein C.
   
 
 0.999
hoxH_2
NAD-reducing hydrogenase HoxS subunit beta; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.995
mer
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
   
 
 0.972
KZX10911.1
Coenzyme F420-reducing hydrogenase subunit beta.
 
 0.946
KZX13904.1
Coenzyme F420-reducing hydrogenase subunit beta.
 
 0.944
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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