STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagF_3CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase. (716 aa)    
Predicted Functional Partners:
epsH_4
Putative glycosyltransferase EpsH.
  
0.917
epsJ_1
Putative glycosyltransferase EpsJ.
  
0.912
epsH_5
Putative glycosyltransferase EpsH.
  
0.908
epsH_3
Putative glycosyltransferase EpsH.
  
0.878
epsH_1
Putative glycosyltransferase EpsH.
  
0.857
epsH_7
Putative glycosyltransferase EpsH.
  
0.795
tagF_2
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
    
0.699
tarI
Putative ribitol-5-phosphate cytidylyltransferase.
  
  
 0.648
spsI
Bifunctional IPC transferase and DIPP synthase.
 
  
 0.646
KZX10102.1
Putative glycosyl transferase.
 
     0.618
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.