STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutA_2Lactate utilization protein A. (298 aa)    
Predicted Functional Partners:
rsxB_1
Electron transport complex subunit RsxB; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.999
KZX11684.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
 0.999
KZX10541.1
Methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.999
hoxY
NAD-reducing hydrogenase HoxS subunit delta.
  
 0.999
hoxH_2
NAD-reducing hydrogenase HoxS subunit beta; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 0.999
ndhI_6
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
   
  
 0.999
mnmC_1
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.998
KZX13831.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
 0.998
KZX10912.1
Methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.998
KZX10911.1
Coenzyme F420-reducing hydrogenase subunit beta.
 
 0.996
Your Current Organism:
Methanobrevibacter oralis
NCBI taxonomy Id: 66851
Other names: DSM 7256, M. oralis, strain ZR
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